DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and tlr13

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_002935047.2 Gene:tlr13 / 100485164 XenbaseID:XB-GENE-5873547 Length:948 Species:Xenopus tropicalis


Alignment Length:1025 Identity:236/1025 - (23%)
Similarity:397/1025 - (38%) Gaps:255/1025 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 RRCMLPG-HTPIASILDYLGIVSPTTLIFESDNLG-----MNITRQHLDRLHG--------LKRF 155
            |:|.|.| ||..|:.:..    |..||.....:|.     :||:...:.::.|        |:..
 Frog    29 RKCSLEGIHTEYANCVGQ----SVVTLADAIQDLPYQTRVLNISENEISKIDGYTFSHLPKLQEL 89

  Fly   156 RFTTRRLTHIPANLLTDMRNLSHLELRAN-IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGK 219
            .....::..:......::.:|..|:|..| |:.:.:....||::|:..:...|::..:..|..|.
 Frog    90 VLRKNKVNGVDTWAFHNLNDLLILDLSYNLIQSLDTVDLTDLKHLQIFDLSHNRIHTIQMGTLGP 154

  Fly   220 MPKLKQLNLWSNQLHN-----------------------LTKHDFEGATSVL----GIDIHDNGI 257
            :..|::|:|..|.:.:                       :|....|.:.:||    .:::.:|.|
 Frog   155 LGALQELDLSFNNVSDFRSVANAVSQLPDFLRLSLSSNFITDLKSEQSVTVLSSLQSLNLRNNSI 219

  Fly   258 EQLPHDVFAHLT----NVTDINLSA---NLFRSLP---QGLFDHNKHLNEVRLMNNRVPLAT--- 309
            ..|....::..:    |||..||||   :.|.:||   :..||.|. ||..:|:...:|..|   
 Frog   220 SVLDFTFYSMPSLIELNVTRNNLSAVNKSSFSNLPMLAKVTFDENS-LNISQLLGLVLPNLTEFH 283

  Fly   310 -----------LPS--RLFANQPELQILRLRAELQSLPGDLFEHSTQITNIS-------LGDNLL 354
                       |.|  ::|...|:||:|           |:......:||:|       |...:|
 Frog   284 WSSMRPALQHELVSACQVFQTFPKLQLL-----------DIKHSKIAVTNLSIIGRCTNLTSLIL 337

  Fly   355 KTLPATLLEHQ-----------------------------VNLLSLDLSNNRLTHLPDSLFAHTT 390
            .|.|...|:.:                             .||.:|.|..|:|:.|.|.||:..|
 Frog   338 STSPLPRLQEKDLQDFKYLEVLYLDKCKLRRIANSSWRGLNNLHTLILERNQLSDLEDKLFSPLT 402

  Fly   391 NLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQP 455
            :|..|.|..|.||.::...||.|..|..|.:...::.......|...:.||.|.|..|.|.|.:.
 Frog   403 SLQYLDLSKNYLTHLNEKAFSGLRRLNYLSLKGCKITAATRNNFRYFSNLRVLDLQDNSISLIKS 467

  Fly   456 LLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFL 520
            ...|           |:..|.||.|..|.|:.:..:....::.|:||.|:.|||..:......|:
 Frog   468 NAHI-----------YLRKLETLLLSGNKILTIQKNGLKGLVSLKELSLANNNIYKITDNTFKFV 521

  Fly   521 SQNRLHVNMTHNK---IRRIALPEDVHLGEGYNNNLVHVDLNDNPLVCDCTILWFIQLVRGVHKP 582
            ...| .::::.|:   :.:...|...       .||..::..|.....:..|.....|.:|:...
 Frog   522 KSLR-SLDLSRNQLWPLHKFQSPTPF-------LNLTQLEYLDASYQAEGNIYIPASLFQGLQSL 578

  Fly   583 QYSRQFKLRTDRLVCSQPNVLEGTP---VRQIEPQTL--ICPLDFS-------DDPRERKCPRGC 635
            :..|                |:|.|   .|.:..:.|  :..||.|       |.|         
 Frog   579 KVLR----------------LQGNPSAFFRNVSFEFLLNLTELDISATVYTMTDPP--------- 618

  Fly   636 NCHVRTYDKALVINCHSGNLTHVPRLPNLHKNMQLMELHLENNTLLRLPS---ANTPGYESVTSL 697
                .:::|.|                 ..|..||..|.|:||.:..||.   .|.|..|.::  
 Frog   619 ----ISFEKEL-----------------FKKLGQLRNLTLDNNGIQFLPEDVFTNVPMLEHIS-- 660

  Fly   698 HLAGNNLTSIDVDQLPT--NLTHLDISWNHLQMLNATVLGFLNRTMKWRSVKLSGNPWM---CDC 757
             |..|.||:|..|.|..  ||.:.|:..|.|..                   ...|.|.   ..|
 Frog   661 -LRYNRLTNISEDILKNVPNLNYFDMYMNTLSC-------------------SCDNYWFQNWSKC 705

  Fly   758 TAKPLLLFTQDNFERIG-DRNEMMCVNAEMPTRMVELSTNDICPAEKGVFIALAVVIALTGLLAG 821
            ..:..:.|.| :::..| :.|||:..|.:.     ...||      .|.:..|...|....||. 
 Frog   706 NTEVQIPFIQ-SYKCFGLEANEMLFENQDF-----SFCTN------TGYYFFLGSFIITFSLLT- 757

  Fly   822 FTAALYYKFQTEIKIWLYAHNLLLWFVTE-EDLDKDKKFDAFISYSHKDQSFIEDYLVPQL-EHG 884
             ...|..|.:..:: ::|. .|.:||..: |..||..|:||:|||...|:.::.:.|:..| |.|
 Frog   758 -VNLLVVKLKWTVR-YMYC-MLEVWFRWKLETTDKVHKYDAYISYCEDDEIWVVEKLLHMLEEQG 819

  Fly   885 PQKFQLCVHERDWLVGGHIPENIMRSVADSRRTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSR 949
            .:||:||...||::.|.:..:||..::::||:|:.|:|:.:::|||.|.|.:.|...|.:.....
 Frog   820 QRKFKLCFKPRDFVPGIYHLDNIQDAISNSRKTLCVVSRKYLESEWCREEMQLACSWAFSYKEDV 884

  Fly   950 IIVIIYSDIGDVE-KLDEELKAYLKMNTYLKW-----GDPWFWDKLRFAL 993
            ::::...:|.:.. ....:|:..:|.|||:.|     |:..||.|||.||
 Frog   885 LLMVFLEEIPEYRLSAYHKLRKLIKQNTYIDWPEDPRGEEVFWLKLRQAL 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 15/59 (25%)
leucine-rich repeat 176..198 CDD:275380 7/22 (32%)
leucine-rich repeat 199..222 CDD:275380 4/22 (18%)
LRR 222..576 CDD:443914 98/445 (22%)
leucine-rich repeat 223..270 CDD:275380 11/77 (14%)
leucine-rich repeat 271..294 CDD:275380 12/28 (43%)
leucine-rich repeat 295..320 CDD:275380 8/40 (20%)
leucine-rich repeat 321..343 CDD:275380 4/21 (19%)
leucine-rich repeat 344..367 CDD:275380 8/58 (14%)
leucine-rich repeat 368..391 CDD:275380 9/22 (41%)
leucine-rich repeat 392..415 CDD:275380 9/22 (41%)
leucine-rich repeat 416..439 CDD:275380 3/22 (14%)
leucine-rich repeat 440..474 CDD:275380 9/33 (27%)
leucine-rich repeat 475..498 CDD:275380 6/22 (27%)
leucine-rich repeat 499..520 CDD:275380 7/20 (35%)
leucine-rich repeat 523..552 CDD:275380 3/31 (10%)
LRRCT 561..619 CDD:214507 9/62 (15%)
LRRNT 631..667 CDD:214470 2/35 (6%)
PPP1R42 <660..752 CDD:455733 24/96 (25%)
leucine-rich repeat 664..693 CDD:275380 11/31 (35%)
leucine-rich repeat 694..715 CDD:275380 7/22 (32%)
leucine-rich repeat 716..737 CDD:275380 4/20 (20%)
LRRCT 751..800 CDD:214507 12/52 (23%)
TIR 858..996 CDD:214587 47/143 (33%)
tlr13XP_002935047.2 leucine-rich repeat 62..85 CDD:275380 3/22 (14%)
LRR <80..>285 CDD:443914 41/205 (20%)
leucine-rich repeat 86..133 CDD:275380 8/46 (17%)
leucine-rich repeat 134..157 CDD:275380 4/22 (18%)
leucine-rich repeat 158..208 CDD:275380 8/49 (16%)
leucine-rich repeat 209..231 CDD:275380 3/21 (14%)
leucine-rich repeat 232..307 CDD:275380 21/75 (28%)
leucine-rich repeat 308..331 CDD:275380 7/33 (21%)
LRR 310..656 CDD:443914 89/421 (21%)
leucine-rich repeat 332..355 CDD:275380 5/22 (23%)
leucine-rich repeat 356..379 CDD:275380 0/22 (0%)
leucine-rich repeat 380..403 CDD:275380 9/22 (41%)
leucine-rich repeat 404..427 CDD:275380 9/22 (41%)
leucine-rich repeat 428..451 CDD:275380 3/22 (14%)
leucine-rich repeat 452..475 CDD:275380 9/33 (27%)
leucine-rich repeat 476..499 CDD:275380 6/22 (27%)
leucine-rich repeat 500..523 CDD:275380 8/22 (36%)
leucine-rich repeat 524..577 CDD:275380 9/60 (15%)
leucine-rich repeat 578..631 CDD:275380 14/98 (14%)
LRR_8 631..685 CDD:404697 20/56 (36%)
leucine-rich repeat 632..655 CDD:275380 8/22 (36%)
leucine-rich repeat 656..676 CDD:275380 8/22 (36%)
TIR 792..935 CDD:214587 47/143 (33%)

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