DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and Olig3

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_443734.2 Gene:Olig3 / 94222 MGIID:2149955 Length:273 Species:Mus musculus


Alignment Length:266 Identity:73/266 - (27%)
Similarity:102/266 - (38%) Gaps:47/266 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KDSRKRKTASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEPASKSRKNAPTKSKTKA 88
            ::||....:|.:|:   :.||.       .|||.:.|.        |:.|.:|.| ...|.:...
Mouse    34 QESRLNSVSSTQGD---MVQKM-------PGESLSRAG--------AKAAGESSK-YKIKKQLSE 79

  Fly    89 PPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITML 153
            ..|.:.|.| .|.|||.||.::|.|.:.||..:|.| .|...    .||:||.||.||..||.||
Mouse    80 QDLQQLRLK-INGRERKRMHDLNLAMDGLREVMPYA-HGPSV----RKLSKIATLLLARNYILML 138

  Fly   154 TDSIRDPSYESEFIGECL--EESANREARVDLEANEEAEVELPV-PVAKKPAKTKGSGKKSSAAS 215
            |.|:.:   ....:||..  ..||.....|...|...|.....| ||.........||..||..|
Mouse   139 TSSLEE---MKRLVGEIYGGHHSAFHCGTVGHSAGHPAHAANAVHPVHPILGGALSSGNASSPLS 200

  Fly   216 KRQSQKQAKI--------VPQIPP---ISSGESCYA-----TSSIGSPASSAYASLSSSSNSHSS 264
            .........|        .|..||   :.||...:|     .:....|.....::||:::.:..|
Mouse   201 ATSLPTIGTIRPPHSLLKAPSTPPALQLGSGFQHWAGLPCPCTICQMPPPPHLSALSTANMARLS 265

  Fly   265 SSSPGL 270
            :.|..|
Mouse   266 AESKDL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 28/61 (46%)
Olig3NP_443734.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72 14/56 (25%)
bHLH_TS_OLIG3 70..150 CDD:381511 32/89 (36%)

Return to query results.
Submit another query.