DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and atoh8

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001073460.2 Gene:atoh8 / 561606 ZFINID:ZDB-GENE-061215-7 Length:266 Species:Danio rerio


Alignment Length:109 Identity:39/109 - (35%)
Similarity:55/109 - (50%) Gaps:12/109 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AEPASKSRKNA--PTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAAN 132
            :|.|...||.|  |:...|:...:.:.||..||||||||:..|:.|||.||..||       ..:
Zfish   149 SERAESPRKRAGEPSGVVTEIKAIQQTRRLLANARERTRVHTISAAFEALRKQVP-------CYS 206

  Fly   133 TNEKLTKITTLRLAMKYI---TMLTDSIRDPSYESEFIGECLEE 173
            ..:||:|:..||:|..||   ..|.|....|.:.:....||:|:
Zfish   207 YGQKLSKLAILRIACNYILSLAQLADLDYTPDHRNMSFRECVEQ 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 28/64 (44%)
atoh8NP_001073460.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..164 6/14 (43%)
bHLH_TS_ATOH8 169..236 CDD:381427 28/73 (38%)
Basic motif, degenerate. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 175..188 9/12 (75%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 189..227 16/44 (36%)

Return to query results.
Submit another query.