DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Neurod2

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_062199.2 Gene:Neurod2 / 54276 RGDID:3166 Length:382 Species:Rattus norvegicus


Alignment Length:374 Identity:95/374 - (25%)
Similarity:136/374 - (36%) Gaps:116/374 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ARATDSKDSRKRKTASARGEKY------SLRQKRQKRGSNEDGESANLADFQLELDPIAE-PASK 75
            ||||        |..|.|||:.      .::::.:..|..|:.|.        |.:.:.| ...:
  Rat    52 ARAT--------KPVSLRGEEVPEPTLAEVKEEGELGGEEEEEEE--------EEEGLDEAEGER 100

  Fly    76 SRKNAPTKSK-TKAP-PLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLT 138
            .:|..|.|.| |||. ..||.||:.||||||.||.::|.|.:.||..||       ..:..:||:
  Rat   101 PKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVP-------CYSKTQKLS 158

  Fly   139 KITTLRLAMKYITMLTDSIRD------PSY-----------ESEFIGECL---------EESANR 177
            ||.|||||..||..|::.:|.      .||           .:..:..||         |:.|:.
  Rat   159 KIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADG 223

  Fly   178 EARVDLEANEEAEVELPVPVAKKPAKTKGSGKKSSAASKRQSQKQAKIVPQIPPISSGESCYATS 242
            ..|........|....|.|.::                                 .:|..|.|..
  Rat   224 AGRFHGSGGPFAMHPYPYPCSR---------------------------------LAGAQCQAAG 255

  Fly   243 SIGSPAS---------SAYASL------SSSSNSHSSSSSPGLELDSLVGLNGISALDSLLLDTS 292
            .:|..|:         :||.:|      ..:|..::||...| .|...:.|||..   ||..|:|
  Rat   256 GLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEG-PLSPPLCLNGNF---SLKQDSS 316

  Fly   293 DGDSLSCLSPGYGSLLTGS---GESLLPG---CRGDLPMSGLEKSDVEL 335
            .....|.....:.|.|.||   |..|:.|   .||.:....|...|:.|
  Rat   317 PDHEKSYHYSMHYSALPGSRPAGHGLVFGSSAVRGGVHSENLLSYDMHL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 28/61 (46%)
Neurod2NP_062199.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..129 27/92 (29%)
bHLH_TS_NeuroD2 88..180 CDD:381563 40/106 (38%)
Nuclear localization signal. /evidence=ECO:0000255 107..113 2/5 (40%)
Neuro_bHLH 180..310 CDD:463621 26/166 (16%)

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