DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Atoh1

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001102708.1 Gene:Atoh1 / 500156 RGDID:1565171 Length:351 Species:Rattus norvegicus


Alignment Length:290 Identity:75/290 - (25%)
Similarity:110/290 - (37%) Gaps:72/290 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DSKDSRKRKT------ASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEPASKSRKNA 80
            ||.|.|...|      .:||..:|.|..  .:.|::|.....:.||.|.||...:.....|:...
  Rat    55 DSTDPRAWLTPTLQGLCTARAAQYLLHS--PELGASEAAAPGDEADGQGELVRRSGCGGLSKSPG 117

  Fly    81 PTK-------------------SKTKAPP------LSKYRRKTANARERTRMREINTAFETLRHC 120
            |.|                   |:.:||.      :.|.||..||||||.||..:|.||:.||:.
  Rat   118 PVKVREQLCKLKGGVVVDELGCSRQRAPSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNV 182

  Fly   121 VPEAIKGEDAANTNEKLTKITTLRLAMKYITMLTDSIRDPSYESEFIGE--------CLEESANR 177
            :|       :.|.::||:|..||::|..||..|::.::.||     :||        |..:..:.
  Rat   183 IP-------SFNNDKKLSKYETLQMAQIYINALSELLQTPS-----VGEQPPPPAASCKNDHHHL 235

  Fly   178 EARVDLEANEEAEVELPVPVAKKPAKTKGSGKKSS---AASKRQSQKQAKIVPQIPPISSGESCY 239
            .|....|....|.    .....:||  .|.|.:.:   |...|.|          .|.|||....
  Rat   236 RAAASYEGGAGAS----AVAGAQPA--PGGGPRPTPPGACRTRFS----------TPASSGGYSV 284

  Fly   240 ATSSIGSPASSAYASLSSSSNSHSSSSSPG 269
            ...::..||....|..:..:....|.|.||
  Rat   285 QLDALHFPAFEDRALTAMMAQKDLSPSLPG 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 26/61 (43%)
Atoh1NP_001102708.1 bHLH_TS_ATOH1 152..215 CDD:381556 27/69 (39%)

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