DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and HLH54F

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_477302.1 Gene:HLH54F / 37027 FlyBaseID:FBgn0022740 Length:242 Species:Drosophila melanogaster


Alignment Length:99 Identity:32/99 - (32%)
Similarity:51/99 - (51%) Gaps:21/99 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 KSRKNAPTK-----------SKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGE 128
            |.|.::||:           |::..||:   :|..||||||.|||.:::|:..|:..:|.     
  Fly     4 KKRSSSPTEFFDDDFDEDASSQSSQPPV---QRNAANARERMRMRVLSSAYGRLKTKLPN----- 60

  Fly   129 DAANTNEKLTKITTLRLAMKYITMLTDSIRDPSY 162
              ...:.||:|:.|||||..||..|..::...|:
  Fly    61 --IPPDTKLSKLDTLRLATLYIKQLITAVETGSH 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 24/61 (39%)
HLH54FNP_477302.1 bHLH_TS_musculin_like 32..87 CDD:381429 24/61 (39%)

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