DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Ascl5

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001385517.1 Gene:Ascl5 / 363991 RGDID:1561854 Length:188 Species:Rattus norvegicus


Alignment Length:172 Identity:36/172 - (20%)
Similarity:57/172 - (33%) Gaps:75/172 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 NARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLTDSIRDPSYES 164
            |.|||.|::.:|..:..||..:|.|:       ..::|:|:.|||.|::||..|.:.:       
  Rat    86 NERERQRVKCVNEGYARLRGHLPGAL-------AEKRLSKVETLRAAIRYIKYLQELL------- 136

  Fly   165 EFIGECLEESANREARVDLEANEEAEVELPVPVAKKPAKTKGSGKKSSAASKRQSQKQAKIVPQI 229
                                   .|..:...|.|..|                            
  Rat   137 -----------------------SAAPDGAPPTATSP---------------------------- 150

  Fly   230 PPISSGESCYATSSIGSPASSAYASLSSSSNSHSSSSSPGLE 271
            ||..:|..    :::..|      ||.:.|:..|.|.||.||
  Rat   151 PPAHAGHG----NALQPP------SLVAESSGSSFSPSPFLE 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 19/56 (34%)
Ascl5NP_001385517.1 bHLH_TS_ASCL5 76..136 CDD:381590 19/56 (34%)

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