DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and msgn1

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_878302.1 Gene:msgn1 / 360135 ZFINID:ZDB-GENE-030722-1 Length:131 Species:Danio rerio


Alignment Length:111 Identity:32/111 - (28%)
Similarity:52/111 - (46%) Gaps:11/111 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SNED---GESANLADFQLELDPIAEPASKSRKNAPTKSKTKAPP---LSKYRRKTANARERTRMR 108
            |.||   |:||:..:.:......:.|.::|...|..:...:..|   :|..||..|:.||:.|||
Zfish    20 SREDRSFGDSASSPESESFDSACSSPDARSSPTAGCEHAEQQKPKVKMSMRRRMKASEREKLRMR 84

  Fly   109 EINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLT 154
            .:..|...||..:|...     :...:.||||.||:..::||..|:
Zfish    85 SLAEALHQLRDYLPPGY-----SRRGQPLTKIQTLKYTIQYIKELS 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 21/60 (35%)
msgn1NP_878302.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..79 13/56 (23%)
bHLH_TS_Msgn1 64..129 CDD:381509 22/67 (33%)

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