DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and olig2

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_835201.1 Gene:olig2 / 325288 ZFINID:ZDB-GENE-030131-4013 Length:273 Species:Danio rerio


Alignment Length:151 Identity:43/151 - (28%)
Similarity:64/151 - (42%) Gaps:23/151 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DSKDSR-KRKTASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEPASKSRKNAPTKSK 85
            ||..|| ..:.:|..|:...|...::..|.     |..::..|.:..|....|.....::..:..
Zfish     2 DSDTSRVSSRPSSPEGDDLFLSAVKKSVGF-----SGAVSSTQSDSPPELRGADMRGISSAEEDS 61

  Fly    86 TKAPPLSKYRRK------------TANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLT 138
            .....|||..||            ..|:|||.||.::|.|.:.||..:|.| .|...    .||:
Zfish    62 MALKMLSKKDRKLLSENELQSMRLKINSRERKRMHDLNIAMDGLREVMPYA-HGPSV----RKLS 121

  Fly   139 KITTLRLAMKYITMLTDSIRD 159
            ||.||.||..||.||::|:.:
Zfish   122 KIATLLLARNYILMLSNSLEE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 27/73 (37%)
olig2NP_835201.1 bHLH_TS_OLIG2 69..151 CDD:381510 29/79 (37%)

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