DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Lyl1

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001007678.1 Gene:Lyl1 / 304663 RGDID:1359244 Length:278 Species:Rattus norvegicus


Alignment Length:148 Identity:43/148 - (29%)
Similarity:59/148 - (39%) Gaps:35/148 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 PLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLT 154
            |....||...|:|||.|.:.:|.||..||..:|       ....:.||:|...||||||||..|.
  Rat   145 PQKVARRVFTNSRERWRQQHVNGAFAELRKLLP-------THPPDRKLSKNEVLRLAMKYIGFLV 202

  Fly   155 DSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKPAKTKG-SGKKSSAASKRQ 218
            ..:||                  :|.| |.:...|      |.::||...:| .|.....|..| 
  Rat   203 RLLRD------------------QAAV-LASGPSA------PGSRKPPAHRGVEGNARCGAGHR- 241

  Fly   219 SQKQAKIVPQIPPISSGE 236
             .:.|:..|.:|....|:
  Rat   242 -VEAARSQPVLPGDCDGD 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 25/61 (41%)
Lyl1NP_001007678.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
bHLH_TS_LYL1 145..209 CDD:381548 28/88 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..278 12/54 (22%)
Blue background indicates that the domain is not in the aligned region.

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