DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and twist3

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_571060.2 Gene:twist3 / 30176 ZFINID:ZDB-GENE-000210-7 Length:199 Species:Danio rerio


Alignment Length:162 Identity:40/162 - (24%)
Similarity:70/162 - (43%) Gaps:22/162 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DSKDSRKRKTA----SARGEKYSLRQKRQKRGSNEDGES----ANLADFQLELDPIAEPASKSRK 78
            :.::.|..|.|    ...|.:..|...:::..|.:|..|    :|||..:.:....:..:|.|..
Zfish    20 EEQERRPNKCAVVVSPPAGARKRLTGPKKEPVSQDDKPSLDNPSNLAPKRPKRSSPSSSSSSSSS 84

  Fly    79 NAPTKSKTKAPPLSKY-----RRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLT 138
            ..|..|.....|...:     :|..||.|||.|.:.:|.||.:||..:|..        .::||:
Zfish    85 LVPVVSSVSPVPGQPFEDLHTQRVIANVRERQRTQSLNDAFASLRKIIPTL--------PSDKLS 141

  Fly   139 KITTLRLAMKYITMLTDSIRDPSYESEFIGEC 170
            ||..|:||.:||..|...::....::: :..|
Zfish   142 KIQILKLASRYIDFLYQVLQSDEMDAK-LASC 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 23/61 (38%)
twist3NP_571060.2 bHLH_SF 98..171 CDD:469605 23/81 (28%)

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