DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Neurog2

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001385606.1 Gene:Neurog2 / 295475 RGDID:1309061 Length:263 Species:Rattus norvegicus


Alignment Length:303 Identity:85/303 - (28%)
Similarity:116/303 - (38%) Gaps:95/303 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKSNTYELHN--------------YADLNDMARATD-SKDSRKRKTASARGEKYSLRQKRQKRGS 50
            :||.|.||..              .|.|..|:.:.| .:|...|:..:|||      |:..:.|.
  Rat     3 VKSETLELKEEEEVLMLLGSASPASATLTPMSSSADEEEDEELRRPGAARG------QRGAEAGQ 61

  Fly    51 NEDGESANLAD-----------FQLELDPI-AEPASKSRKNAPTKSKTKAPPLSKYRRKTANARE 103
            ...|.||:.|.           .:.:..|. |...|:..|.|.|..:.|     |.||..||.||
  Rat    62 GVQGSSASGAGGCRPGRLLGLVHECKRRPSRARAVSRGAKTAETVQRIK-----KTRRLKANNRE 121

  Fly   104 RTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLTDSIRDPSYESEFIG 168
            |.||..:|.|.:.||..:|..  .|||     |||||.|||.|..||..||:::|...:.:.  |
  Rat   122 RNRMHNLNAALDALREVLPTF--PEDA-----KLTKIETLRFAHNYIWALTETLRLADHCAG--G 177

  Fly   169 ECLEESANREARVDLEANEEAEVELPVPVAKKPAKTKGSGKKSSAASKRQSQKQAKIVPQIPPIS 233
            ..|:.:...||                 |...|....|:...|                  |..|
  Rat   178 GSLQGALFSEA-----------------VLLSPGAALGASGDS------------------PSPS 207

  Fly   234 SGESCYATSSIGSPASSAYASLSSSSNSHS---SSSSPGLELD 273
            |..||     ..|||||     |:|::.:|   |.:|||.::|
  Rat   208 SSWSC-----TNSPASS-----SNSTSPYSCTLSPASPGSDVD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 30/61 (49%)
Neurog2NP_001385606.1 bHLH_TS_NGN2_ATOH4 104..172 CDD:381560 34/79 (43%)

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