DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and Olig3

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001099739.1 Gene:Olig3 / 293012 RGDID:1305997 Length:273 Species:Rattus norvegicus


Alignment Length:258 Identity:68/258 - (26%)
Similarity:97/258 - (37%) Gaps:68/258 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KDSRKRKTASARGEKYSLRQKRQKRGSNEDGESANLADFQLELDPIAEPASKSRKNAPTKSKTKA 88
            ::||....:|.:|:   :.||.       .|||.:.|.        |:.|.:|.| ...|.:...
  Rat    34 QESRLNSVSSTQGD---MVQKM-------PGESLSRAG--------AKAAGESSK-YKIKKQLSE 79

  Fly    89 PPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITML 153
            ..|.:.|.| .|.|||.||.::|.|.:.||..:|.| .|...    .||:||.||.||..||.||
  Rat    80 QDLQQLRLK-INGRERKRMHDLNLAMDGLREVMPYA-HGPSV----RKLSKIATLLLARNYILML 138

  Fly   154 TDSIRDPSYESEFIGECL--EESANREARVDLEANEEAEVELPVPVAKKPAKTKGSGKKSSAASK 216
            |.|:.:   ....:||..  ..||.....|...|...|..                         
  Rat   139 TSSLEE---MKRLVGEIYGGHHSAFHCGTVGHSAGHPAHA------------------------- 175

  Fly   217 RQSQKQAKIVPQIPPISSGESCYATSSIGSPASSA-YASLSSSSNSHS----SSSSPGLELDS 274
                  |..|..:.||..|  ..::.:..||.|:| ..::.:....||    .|:.|.|:|.|
  Rat   176 ------ANAVHPVHPILGG--ALSSGNASSPLSAASLPTIGTIRPPHSLLKAPSTPPALQLGS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 28/61 (46%)
Olig3NP_001099739.1 bHLH_TS_OLIG3 70..150 CDD:381511 32/89 (36%)

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