DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tx and Ascl2

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_113691.1 Gene:Ascl2 / 24209 RGDID:2159 Length:260 Species:Rattus norvegicus


Alignment Length:191 Identity:48/191 - (25%)
Similarity:74/191 - (38%) Gaps:60/191 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLT 138
            |:.|::..|::.:.:..:::     .|.|||.|::.:|..|:.||..||.       ...|:||:
  Rat   103 SRRRRSGATEASSSSAAVAR-----RNERERNRVKLVNLGFQALRQHVPH-------GGANKKLS 155

  Fly   139 KITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKPAK 203
            |:.|||.|::||..|...:             .|..|.|.|   |..........|..|..:|:.
  Rat   156 KVETLRSAVEYIRALQRLL-------------AEHDAVRAA---LSGGLLTPATRPSDVCTQPSA 204

  Fly   204 TKGSGKKSSAASKRQSQKQAKIVPQIPPISSGESCYATS----SIGSPAS--SAYASLSSS 258
            :                          |.|:..||.:||    ....|||  |||:|..||
  Rat   205 S--------------------------PASASLSCTSTSPDRLGCSEPASPRSAYSSEDSS 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 22/61 (36%)
Ascl2NP_113691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..126 4/27 (15%)
bHLH_TS_ASCL2_Mash2 128..180 CDD:381586 20/71 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..239 16/73 (22%)

Return to query results.
Submit another query.