DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and hnd-1

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_509952.1 Gene:hnd-1 / 183457 WormBaseID:WBGene00001981 Length:226 Species:Caenorhabditis elegans


Alignment Length:173 Identity:46/173 - (26%)
Similarity:74/173 - (42%) Gaps:41/173 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 SKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMK 148
            |..::....|.|::.:..:|..|.:.||:|||.|:..:| .:|.|:    .:.|.||.||||||:
 Worm    13 SSLESTDSKKSRKEKSREKEHRRAQCINSAFEILQQHIP-YLKSEE----RKSLPKIKTLRLAMQ 72

  Fly   149 YITMLTDSIRDPSYESEFIG--ECLEESANREAR----VDLEANEEAEV-------------ELP 194
            ||..|          .:.:|  |.||...| |:|    .|...|...|:             ||.
 Worm    73 YIDHL----------KKLLGGNEMLETDCN-ESRPLTHSDFRVNISNEIRIRNSYRERAHNQELD 126

  Fly   195 VPVAKKPAKTKGSGKKSSAAS---KRQSQKQAKIVPQIPPISS 234
            ....|:....:...::.|:..   :|.:..|::   |..|||:
 Worm   127 EATVKRILAREDQRRRCSSVPEGIQRYTPYQSR---QFGPISN 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 24/61 (39%)
hnd-1NP_509952.1 bHLH_TS_ASCL 24..81 CDD:381424 24/71 (34%)

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