DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and hlh-3

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_495938.4 Gene:hlh-3 / 174447 WormBaseID:WBGene00001950 Length:170 Species:Caenorhabditis elegans


Alignment Length:196 Identity:51/196 - (26%)
Similarity:77/196 - (39%) Gaps:50/196 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PASKSRKNAPTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEK 136
            |::.::  .|:.||:.....:|.:|   |.|||.|:.::|..|..|:..||:      ||....|
 Worm     9 PSTSTK--IPSSSKSSVTKQTKQKR---NERERKRVDQVNQGFVLLQERVPK------AAGNKAK 62

  Fly   137 LTKITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKP 201
            |:|:.|||.|.:||..|...:...|           .|.:.....|....|::.| .|..|....
 Worm    63 LSKVETLREAARYIQELQKQLGMSS-----------TSFHNSMPADFPTPEQSPV-YPQSVCSMM 115

  Fly   202 AKTKGSGKKSSAASKRQSQKQAKIVPQIPP---ISSGESCYATSSIGSPASSAYASLSSSSNSHS 263
            |:|......|               |..||   :||.:         ...||.|...||||::.:
 Worm   116 AQTPSPSYTS---------------PYYPPPQMMSSNQ---------HDMSSHYYQESSSSSAST 156

  Fly   264 S 264
            |
 Worm   157 S 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 23/61 (38%)
hlh-3NP_495938.4 bHLH_TS_ASCL 28..83 CDD:381424 24/63 (38%)
COG3416 <47..>136 CDD:442642 28/121 (23%)

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