DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and atoh1c

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_021336148.1 Gene:atoh1c / 100498672 ZFINID:ZDB-GENE-090805-1 Length:204 Species:Danio rerio


Alignment Length:99 Identity:33/99 - (33%)
Similarity:50/99 - (50%) Gaps:8/99 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMKYITMLTDSIRD 159
            ||..||||||.||..:|.||:.||..:|.       ..::.||:|..||::|..||:.|::.:.|
Zfish    72 RRLAANARERRRMLGLNVAFDRLRSVIPN-------VESDRKLSKSETLQMAQIYISTLSELLED 129

  Fly   160 PSYESEFIGECLEESANREARVDLEANEEAEVEL 193
            ...:.|.....| ...:::....|...||.:.||
Zfish   130 KDCDPETPYPTL-TMQDQDITKGLPMTEETKTEL 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 25/61 (41%)
atoh1cXP_021336148.1 bHLH_SF 80..127 CDD:469605 19/53 (36%)

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