DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and ascl2

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_002940290.3 Gene:ascl2 / 100494131 XenbaseID:XB-GENE-6458615 Length:236 Species:Xenopus tropicalis


Alignment Length:283 Identity:59/283 - (20%)
Similarity:91/283 - (32%) Gaps:106/283 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SARGEKYSLRQKRQKRGSNEDGESA----NLADFQLELDPIAEPASKSRKNAPTKSKTKAPPLSK 93
            :..|:..:...:|..:|.:...|..    .|......:.|:|.|:|...:...::...|||    
 Frog    21 AGEGKLITFTTRRHNKGKSFQREQVPSGPTLERKATPVVPVAPPSSAMEEQPGSERPAKAP---- 81

  Fly    94 YRRKTA-------------------------------NARERTRMREINTAFETLRHCVPEAIKG 127
              ||.|                               |.|||.|::.:|..|..||..||:    
 Frog    82 --RKVANQSGSPQRLRCQRRSGSLPNAIGISATSERRNERERNRVKLVNLGFAKLRQHVPQ---- 140

  Fly   128 EDAANTNEKLTKITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVE 192
              |...|:|::|:.|||.|::||..|...:             :|.:|.                
 Frog   141 --AQGPNKKMSKVETLRSAVEYIRALQSIL-------------MERTAG---------------- 174

  Fly   193 LPVPVAKKPAKTKGSGKKSSAASKRQSQKQAKIVPQIPPISSGESCYATSSIGSPASSAYASLSS 257
                        :|.|:..|..              :.|  .|.||...|  ||.|.|..:..|.
 Frog   175 ------------EGQGRAGSDG--------------LSP--CGSSCSVDS--GSLALSPGSCSSC 209

  Fly   258 SSNSHSSSSSPGLELDSLVGLNG 280
            :|...|...|...|.|..:.|:|
 Frog   210 ASEDSSRGDSSIAETDFFLTLHG 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 25/92 (27%)
ascl2XP_002940290.3 bHLH_TS_ASCL2_Mash2 110..174 CDD:381586 23/82 (28%)

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