DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and neurog2

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_002934289.2 Gene:neurog2 / 100493110 XenbaseID:XB-GENE-491040 Length:213 Species:Xenopus tropicalis


Alignment Length:201 Identity:55/201 - (27%)
Similarity:87/201 - (43%) Gaps:32/201 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KDSRKRKTASARGEKYSLRQKRQKRGSNEDGE-----SANLADFQLELDPIAEPASKSR---KNA 80
            :|..:..|:::.....|......:..|::|.:     |..|...|.:....:.|:.:||   ||.
 Frog     9 RDEEEELTSASPCSVSSSHMSPAQTCSSDDEQLLSPTSPALMHLQAQEQENSPPSRRSRPRTKNG 73

  Fly    81 PTKSKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRL 145
            .|..|.|     |.||..||.|||.||..:|:|.::||..:|..  .|||     |||||.|||.
 Frog    74 ETVLKVK-----KTRRIKANNRERNRMHHLNSALDSLREVLPSL--PEDA-----KLTKIETLRF 126

  Fly   146 AMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPV-PVAKKPAKTKGSGK 209
            |..||..|::::|           ..|..::......:...:.:..:.|. ..:..|:.:.||..
 Frog   127 AYNYIWALSETLR-----------LAEHGSSASTLSPMSVQDSSPSQSPSWSCSSSPSSSCGSFS 180

  Fly   210 KSSAAS 215
            .:|.||
 Frog   181 PASPAS 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 29/61 (48%)
neurog2XP_002934289.2 bHLH_TS_NGN2_ATOH4 74..142 CDD:381560 34/90 (38%)

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