DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and tcf21

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001103518.1 Gene:tcf21 / 100126209 XenbaseID:XB-GENE-484805 Length:179 Species:Xenopus tropicalis


Alignment Length:153 Identity:43/153 - (28%)
Similarity:63/153 - (41%) Gaps:50/153 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GESANLADFQ---------LELDPIAE-----------------------PASKSRKNAPTKSKT 86
            |..:::.|||         ::|||..|                       ..|..|:.||:|.. 
 Frog     4 GSLSDVEDFQEVEMLECDGIKLDPNKEFGISNDSNEESSTCDNGSPKKGRGTSGKRRKAPSKKS- 67

  Fly    87 KAPPL-------SKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLR 144
               ||       .:.:|..||||||.|||.::.||..|:..:|       ....:.||:|:.|||
 Frog    68 ---PLGNINQEGKQVQRNAANARERARMRVLSKAFSRLKTTLP-------WVPPDTKLSKLDTLR 122

  Fly   145 LAMKYITMLTDSIRDPSYESEFI 167
            ||..||..|...:.:..||:.:|
 Frog   123 LASSYIAHLRQILANDKYENGYI 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 25/61 (41%)
tcf21NP_001103518.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..87 14/67 (21%)
bHLH_TS_TCF21_capsulin 77..140 CDD:381547 25/69 (36%)

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