DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and neurod4

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001124513.1 Gene:neurod4 / 100124310 XenbaseID:XB-GENE-972704 Length:316 Species:Xenopus tropicalis


Alignment Length:190 Identity:54/190 - (28%)
Similarity:76/190 - (40%) Gaps:51/190 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SNTYELHNYADLNDMARATDSKDSRKRKTASARGEKYSL------RQKRQKRGSNEDGESANLAD 61
            |....:|.:     |..|..|:|..:|   :.|...|.:      .::....|.::|.|.     
 Frog     2 SEIVSVHGW-----MEEALSSQDEMER---NQRQSAYDIISGLSHEERCSIDGEDDDEEE----- 53

  Fly    62 FQLELDPIAEPASKSRKNAPTKSKTKAPPLSKY--RRKTANARERTRMREINTAFETLRHCVPEA 124
                     |...|.:|..|.|.|.....|.::  ||..|||||||||..:|.|.|.||..:|  
 Frog    54 ---------EDGEKPKKRGPKKKKMTKARLERFRVRRVKANARERTRMHGLNDALENLRRVMP-- 107

  Fly   125 IKGEDAANTNEKLTKITTLRLAMKYITMLTDSIRDPSYESEFIGECLEESANREARVDLE 184
                 ..:..:||:||.|||||..||..|:|              .||:..:.|.:..||
 Frog   108 -----CYSKTQKLSKIETLRLARNYIWALSD--------------ILEQGQSTEGKGFLE 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 30/61 (49%)
neurod4NP_001124513.1 bHLH_TS_NeuroD4_ATOH3 <69..137 CDD:381564 32/88 (36%)
Neuro_bHLH 138..256 CDD:463621 3/11 (27%)

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