DRSC/TRiP Functional Genomics Resources

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Protein Alignment tx and neurog3

DIOPT Version :10

Sequence 1:NP_524516.2 Gene:tx / 43190 FlyBaseID:FBgn0288888 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_002935814.2 Gene:neurog3 / 100038294 XenbaseID:XB-GENE-876279 Length:226 Species:Xenopus tropicalis


Alignment Length:299 Identity:71/299 - (23%)
Similarity:97/299 - (32%) Gaps:127/299 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QKRGSNE------DGESANLA-----DFQLEL---------DPIAEPASKSRK-------NAPTK 83
            |:|..:|      |.|....:     |.||.|         |..:.|....||       .:..|
 Frog    11 QRRSESELYYEISDNEVPPFSPPCTPDSQLSLAESEDCTLVDGYSHPRGNERKKQKVKRMRSKVK 75

  Fly    84 SKTKAPPLSKYRRKTANARERTRMREINTAFETLRHCVPEAIKGEDAANTNEKLTKITTLRLAMK 148
            |.|......:.||..||.|||.||..:|:|.:.||..:|..  .:||     |||||.|||.|..
 Frog    76 SNTTVIKQRRNRRVKANDRERNRMHNLNSALDALRSVLPTF--PDDA-----KLTKIETLRFAHN 133

  Fly   149 YITMLTDSIRDPSYESEFIGECLEESANREARVDLEANEEAEVELPVPVAKKPAKTKGSGKKSSA 213
            ||..|::::|                                                     .|
 Frog   134 YIWALSETLR-----------------------------------------------------MA 145

  Fly   214 ASKRQSQKQAKIVPQIPPISSGESCYATSSIGSPASSAYASLSSSSNSHSSSSSPGLELDSLVGL 278
            .....|.:|..::..:..:              |.|.....|||.::|.||:     |.|||   
 Frog   146 DQSLLSPEQQHLLDSLKKL--------------PKSCLMMDLSSPTSSTSST-----EWDSL--- 188

  Fly   279 NGISALDSLLLDTSDGDSLSCLSPGYGSLLTGSGESLLP 317
                 ...|..|:|       |||      |||.:.|:|
 Frog   189 -----YSPLFQDSS-------LSP------TGSMDELMP 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
txNP_524516.2 bHLH_TS_taxi_Dei 95..157 CDD:381437 28/61 (46%)
neurog3XP_002935814.2 bHLH_TS_NGN3_ATOH5 80..147 CDD:381561 30/126 (24%)

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