DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osy and livF

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_417911.4 Gene:livF / 947961 ECOCYCID:EG10536 Length:237 Species:Escherichia coli


Alignment Length:243 Identity:59/243 - (24%)
Similarity:114/243 - (46%) Gaps:43/243 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 AHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEI--------- 108
            ||  ||..:    .|..:::.:.:|.|..|:||:|.||||||..:.|..|..||.|         
E. coli    13 AH--YGKIQ----ALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITD 71

  Fly   109 WVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNL 173
            |        :.:.:....:..:|:...::...|:.|.|...|..:  .:...::|.:::.:|...
E. coli    72 W--------QTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA--ERDQFQERIKWVYELFPR 126

  Fly   174 PNASKFVK--NLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTV 236
            .:..:..:  .:|||:|:.:::..||:..|.||:||||::|:.|::.|.|:|.:..:.:.|.|..
E. coli   127 LHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIF 191

  Fly   237 IITTH-----------YIDECAQAHMIGLLRGGKMLAEESPDYLRQQY 273
            ::..:           |:.|  ..|::....|..:||.|:   :|..|
E. coli   192 LVEQNANQALKLADRGYVLE--NGHVVLSDTGDALLANEA---VRSAY 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 59/243 (24%)
YadH 578..773 CDD:440604
livFNP_417911.4 livF 1..237 CDD:183231 59/243 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.