DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osy and ugpC

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_417907.2 Gene:ugpC / 947953 ECOCYCID:EG11048 Length:356 Species:Escherichia coli


Alignment Length:206 Identity:61/206 - (29%)
Similarity:101/206 - (49%) Gaps:16/206 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGR-----PGSRGSGVPGP 125
            |:..|.:.|..|....::|.|||||:|||..:.|..|:..|:||:...|     |..||      
E. coli    19 VIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGDIWINDQRVTEMEPKDRG------ 77

  Fly   126 RIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLPNASK-FVKNLSGGQQR 189
             |..:.|..|||...::.|.:.:...|..|.|..|.:|.:...::|.|....| ..:.|||||::
E. coli    78 -IAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILELDGLLKRRPRELSGGQRQ 141

  Fly   190 RVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTH-YIDECAQAHMIG 253
            ||::..|::.:|.:.:.|||...:|..||..:...|..:.:...||.:..|| .::....|..:.
E. coli   142 RVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVM 206

  Fly   254 LLRGGKMLAEE 264
            ::.||  :||:
E. coli   207 VMNGG--VAEQ 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 61/206 (30%)
YadH 578..773 CDD:440604
ugpCNP_417907.2 ugpC 1..356 CDD:236947 61/206 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.