DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and ybhF

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_415315.4 Gene:ybhF / 945413 ECOCYCID:G6411 Length:578 Species:Escherichia coli


Alignment Length:235 Identity:85/235 - (36%)
Similarity:127/235 - (54%) Gaps:30/235 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQ 132
            |.:|..|.:|.|:||||.:|.||:|....:.|.....||:..|| |......||.....:|||.|
E. coli   346 DHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVL-GMDLKESSGKARQHLGYMAQ 409

  Fly   133 EIALYGEFTMRETLIYF-GI-----------ISAMSKGDIEDRTEFLLKLLNLPNASKFVKNLSG 185
            :.:|||..|:.:.|.:| |:           ||.||:.       |.||.:    ||.....|..
E. coli   410 KFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEA-------FGLKSI----ASHATDELPL 463

  Fly   186 GQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDECAQAH 250
            |.::|::||.:|:|||::|.|||||.||||:.|:..|.|:..:.:.| .||::|||::||.....
E. coli   464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKG-VTVMVTTHFMDEAEYCD 527

  Fly   251 MIGLLRGGKMLAEESPDYLRQQYNAD-----SLEDVFLKL 285
            .|||:..||::|..:||.|:.|...|     ::|..|::|
E. coli   528 RIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQL 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 84/233 (36%)
YadH 578..773 CDD:440604
ybhFNP_415315.4 ABC2_perm_RbbA 5..>565 CDD:468210 83/231 (36%)
Blue background indicates that the domain is not in the aligned region.

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