DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and ybbA

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_415028.1 Gene:ybbA / 945122 ECOCYCID:EG11657 Length:228 Species:Escherichia coli


Alignment Length:232 Identity:64/232 - (27%)
Similarity:104/232 - (44%) Gaps:18/232 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIW 109
            :..|.|....|..|..::...:|.|:.:.|.:|....|:|.||.||:|||:.:.|....:|||:.
E. coli     4 ENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVS 68

  Fly   110 VLG---------GRPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTE 165
            ::|         .|...|..     .:|::.|...|.......|.:....::...|..:..:..:
E. coli    69 LVGQPLHNMDEEARAKLRAK-----HVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAK 128

  Fly   166 FLLKLLNL-PNASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDIT 229
            .||:.|.| .........||||:|:||:||.|....|::|..||||..:|......|.|.|..:.
E. coli   129 ALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLN 193

  Fly   230 KNGHTTVIITTHYIDECAQA-HMIGLLRGGKMLAEES 265
            :...||:|:.||.:...|:. ..:.|:.|  .|.||:
E. coli   194 REHGTTLIMVTHDLQLAARCDRCLRLVNG--QLQEEA 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 63/227 (28%)
YadH 578..773 CDD:440604
ybbANP_415028.1 PRK10584 1..228 CDD:182569 63/230 (27%)
Blue background indicates that the domain is not in the aligned region.

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