DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osy and ABCA10

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001318860.1 Gene:ABCA10 / 836296 AraportID:AT5G61740 Length:909 Species:Arabidopsis thaliana


Alignment Length:283 Identity:75/283 - (26%)
Similarity:136/283 - (48%) Gaps:35/283 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PAATATTANSDLDLAARRRLFISQPSTLATRRQQ-------------AVCVRRAHKMY-GSSKN- 62
            |:.:....||:       .:.|....|..|:.::             |:......|:| ||..| 
plant   546 PSPSVQRQNSE-------NVLIDMEKTDVTQEREKVEKLRKEGTTGHAIVCDNLKKVYPGSDGNP 603

  Fly    63 PNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRI 127
            |.:.:.||.:.||.|..:|:||.:|.|||:.::.:.|..:..||.. ::.|....:........:
plant   604 PKLAVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTA-LVQGLDICKDMNKVYTSM 667

  Fly   128 GYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLPN---ASKFVKNLSGGQQR 189
            |..||...|:|..|.||.|:::|.:..:....:....|..||.::|.:   |.|.....|||.:|
plant   668 GVCPQHDLLWGTLTGREHLLFYGRLKNIKGSALMQAVEESLKSVSLFDGGVADKPAGKYSGGMKR 732

  Fly   190 RVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDE----CAQAH 250
            |:|:|::|:..|:::.:|||:.|:||..|:.:|..:....:|  |.:|:|||.::|    |.:  
plant   733 RLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWTVIQRAKQN--TAIILTTHSMEEAEFLCDR-- 793

  Fly   251 MIGLLRGGKMLAEESPDYLRQQY 273
             :|:...|.:....:|..|:.:|
plant   794 -LGIFVDGGLQCVGNPKELKGRY 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 68/233 (29%)
YadH 578..773 CDD:440604
ABCA10NP_001318860.1 rim_protein <326..>904 CDD:130324 75/283 (27%)
ABC_subfamily_A 591..812 CDD:213230 66/226 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.