DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and ABCA12

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001318859.1 Gene:ABCA12 / 836292 AraportID:AT5G61700 Length:917 Species:Arabidopsis thaliana


Alignment Length:266 Identity:74/266 - (27%)
Similarity:135/266 - (50%) Gaps:28/266 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RRLFISQPSTLATRRQQAVCVRR-----AH--------KMY-GSSKN-PNVVLDGLNMTVPKGSI 79
            :|:||.......|:.:::|...|     .|        |:| |...| |.:.:.||.::|..|..
plant   564 KRVFIDMDKHDVTQERESVQKLRNEGSTGHAILCDNLKKVYPGRDGNPPKMAVRGLYLSVSSGEC 628

  Fly    80 YGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPRIGYMPQEIALYGEFTMRE 144
            :|:||.:|.|||:.:|.:.|..:.:||.. ::.|....:........:|..||...|:...|.||
plant   629 FGMLGPNGAGKTSFISMMTGLLKPSSGTA-LVQGLDICKDMNKVYTSMGVCPQHDLLWETLTGRE 692

  Fly   145 TLIYFGIISAMSKGDIEDRTEFLLKLLNLPN---ASKFVKNLSGGQQRRVSLAVALLHEPELLIL 206
            .|:::|.:..:...|:....|..||.::|.:   ..|...|.|||.:||:|:|::|:..|:::.|
plant   693 HLLFYGRLKNIKGSDLTQAVEESLKSVSLYDGGVGDKPAGNYSGGMKRRLSVAISLIGNPKVVYL 757

  Fly   207 DEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDE----CAQAHMIGLLRGGKMLAEESPD 267
            |||:.|:||..|:::|:.:....:|  |.:|:|||.::|    |.:   :|:...|.:....:..
plant   758 DEPSTGLDPASRKNLWNVIKRAKQN--TAIILTTHSMEEAEFLCDR---LGIFVDGGLQCIGNSK 817

  Fly   268 YLRQQY 273
            .|:.:|
plant   818 ELKSRY 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 69/246 (28%)
YadH 578..773 CDD:440604
ABCA12NP_001318859.1 rim_protein <329..>912 CDD:130324 74/266 (28%)
ABC_subfamily_A 599..820 CDD:213230 65/226 (29%)
Blue background indicates that the domain is not in the aligned region.

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