DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and ABCA6

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001327229.1 Gene:ABCA6 / 823931 AraportID:AT3G47770 Length:926 Species:Arabidopsis thaliana


Alignment Length:288 Identity:74/288 - (25%)
Similarity:137/288 - (47%) Gaps:40/288 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PTAPAATATTANSDLDLAARRRLFISQPSTL------ATRRQQAVCVRRAHKMYGSSKN-PNVVL 67
            ||....:.....||:.:...:...|.:..|:      .::....||........|...| |.:.:
plant   567 PTPQMLSFQKERSDVSVEMEKLDVIQEKETVKQLIFERSKNHGIVCDNLKKVYQGRDGNPPKLAV 631

  Fly    68 DGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGP------R 126
            .||::.||.|..:|:||.:|.|||:.::.:.|..:.:||..:|       :|..:...      .
plant   632 CGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPSSGSAFV-------QGLDICKDMDKVYIS 689

  Fly   127 IGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLPN-------ASKFVKNLS 184
            :|..||...|:...|.:|.|:::|.:..:...|:....|..||.:||.:       |.|:    |
plant   690 MGVCPQHDLLWETLTGKEHLLFYGRLKNLKGHDLNQAVEESLKSVNLFHGGVADIPAGKY----S 750

  Fly   185 GGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDE---- 245
            ||.:||:|:|::|:..|:::.:|||:.|:||..|.::|..:....|  |..:|:|||.::|    
plant   751 GGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRINLWTVIKRAKK--HAAIILTTHSMEEAEFL 813

  Fly   246 CAQAHMIGLLRGGKMLAEESPDYLRQQY 273
            |.:   :|:...|::....:|..|:.:|
plant   814 CDR---LGIFVDGRLQCIGNPKELKGRY 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 66/242 (27%)
YadH 578..773 CDD:440604
ABCA6NP_001327229.1 rim_protein <341..>923 CDD:130324 74/288 (26%)
ABC_subfamily_A 614..835 CDD:213230 64/236 (27%)
Blue background indicates that the domain is not in the aligned region.

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