DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and ABCA1

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_850354.2 Gene:ABCA1 / 818768 AraportID:AT2G41700 Length:1882 Species:Arabidopsis thaliana


Alignment Length:389 Identity:112/389 - (28%)
Similarity:181/389 - (46%) Gaps:64/389 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GVPPTAP------AATATTANSDLDLAARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKN--P 63
            |...|.|      .|.:|....|:|:...|...||..|.     ...:.::...|:|...|:  |
plant  1411 GSSSTEPLLKDSTGAISTDMEDDIDVQEERDRVISGLSD-----NTMLYLQNLRKVYPGDKHHGP 1470

  Fly    64 NVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGVPGPR-- 126
            .|.:..|..:|..|..:|.||.:|.||||.||.:.|.....||..::.|      ...|..|:  
plant  1471 KVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGTAFIFG------KDIVASPKAI 1529

  Fly   127 ---IGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDR-----TEFLLKLLNLPNASKFVKNL 183
               |||.||..||:...|::|.|..:    |..||.::.|     ||.|::...|.::.|....|
plant  1530 RQHIGYCPQFDALFEYLTVKEHLELY----ARIKGVVDHRIDNVVTEKLVEFDLLKHSHKPSFTL 1590

  Fly   184 SGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDI-TKNGHTTVIITTHYIDECA 247
            |||.:|::|:|:|::.:|.::|||||:.|:|||.::.:||.:..: |::|.|.||:|||.::| |
plant  1591 SGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAVILTTHSMNE-A 1654

  Fly   248 QA--HMIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKLSVLQNMGKRRRSSIAQEIVEQVTVP 310
            ||  ..||::.||::....||.:|:.:|..      .|:|.|..|...........:|::|....
plant  1655 QALCTRIGIMVGGRLRCIGSPQHLKTRYGN------HLELEVKPNEVSNVELENFCQIIQQWLFN 1713

  Fly   311 AISNPALDMSDEQHAAEISGEFGDNISMSSAARDPISTT-----------------APAAPPLP 357
            ..:.|...:.|.:....:|    |:|:..:|:...||.:                 :...||||
plant  1714 VPTQPRSLLGDLEVCIGVS----DSITPDTASASEISLSPEMVQRIAKFLGNEQRVSTLVPPLP 1773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 84/249 (34%)
YadH 578..773 CDD:440604
ABCA1NP_850354.2 rim_protein <204..1684 CDD:130324 94/288 (33%)
Blue background indicates that the domain is not in the aligned region.

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