DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and abca12

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_686632.6 Gene:abca12 / 558335 ZFINID:ZDB-GENE-030131-9790 Length:5913 Species:Danio rerio


Alignment Length:970 Identity:186/970 - (19%)
Similarity:311/970 - (32%) Gaps:365/970 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 MYGSSK---NPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGS 117
            :||.:|   ..|.| |.||::..:|.:..|||.:|.||||.:|.:.|......|.|.|.|.....
Zfish  4668 LYGLTKTYGKRNAV-DNLNLSFYEGHVTSLLGHNGAGKTTTMSLLTGLFAPTVGTIEVYGMDMQM 4731

  Fly   118 RGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISA--MSKGDIEDRTEFLLKLLNL-PNASKF 179
            ....| ...:|...|...|:...|.:|.|:.:..|.|  .:|.:::::...:|...:: .:..|.
Zfish  4732 FIDDV-RKEMGVCMQYDVLFDHLTTKEHLLLYAQIKAPHWTKQEVKEQVHKILMETDMHAHRHKR 4795

  Fly   180 VKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYID 244
            |..||||.:|::|:::|.:....|::|||||.||||..|:||||  :.|......|:|::||::|
Zfish  4796 VGTLSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSIWD--IIIQHKQERTIILSTHHLD 4858

  Fly   245 EC-AQAHMIGLLRGGKMLAEESPDYLRQQ----YN---------ADS------------------ 277
            |. ..:..|..|..|.:....||.||:.:    ||         |||                  
Zfish  4859 EAEVLSDRIAFLERGGLKCCGSPFYLKDKLAKGYNLTLTKKVETADSKEKFDYEKLRDFIHSHLP 4923

  Fly   278 ----------------------------------------------------LEDVFLKL----- 285
                                                                ||:|||:|     
Zfish  4924 DARQKDREMGDLVYALPPYTPQNASEYHSLLNSLDQNLDKLHLGCYGISDTTLEEVFLQLTRDDL 4988

  Fly   286 ------------SVLQNMGKRRRSSIAQE------------------------------------ 302
                        ||::|.....|.|::::                                    
Zfish  4989 EPKESETWSVSESVIENDMFASRDSLSEDCNSMYLGEKASLTGNSTVRGFALGVQRVIAMLLKRV 5053

  Fly   303 ---------IVEQVTVPA----------------------ISNPALDMSDEQHAAEISGEFGDN- 335
                     :..||.:|.                      :.:|||...|||:|      |..| 
Zfish  5054 HHSRRDWKGLFSQVLLPVLFVIAAMGLGSIKSDLQHFPEIVLSPALYHVDEQYA------FFSNQ 5112

  Fly   336 ---------ISMSSAARDPISTTAPAAPPLPPPQEIPTSFWYN-------------LHVMQSHHL 378
                     ..||....|.:..|.|..|.........:..|.:             .:.:||   
Zfish  5113 NPNTSRLVDTMMSYPGIDHVCMTDPTDPVCKGRPSTGSQTWVSGGNSSATFTTCKCSNQVQS--- 5174

  Fly   379 HALIWKNFLWMMRNVGVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVH 443
                                            |.|.|:||.                 .:.||  
Zfish  5175 --------------------------------CPAQGYDPP-----------------RKRCP-- 5188

  Fly   444 TGCNQTMLSCRYLDMLVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQPNYTASLMERVEDGRY 508
                               .|.:|..:|.                 |...||..:........||
Zfish  5189 -------------------SSQIVYNLTG-----------------VNIENYLLATANNFIRDRY 5217

  Fly   509 A--EDGTIESSDLAVRMDW----SNQQISQLLYRDLQY----TFFNFVGDMLSDCDVNP-KLGRV 562
            .  |.|.....||  :||.    :|:.:|::.|....:    .:.|.:.:......:.| |..:.
Zfish  5218 GGWEFGKPLPIDL--KMDMLDVPANRTLSKVWYNSEGHHSMPAYLNSLNNFFLRSSLPPEKRYQY 5280

  Fly   563 PVDF-QHPVYGYRNPNFTDFAAPGVILTIIFFLAVAVTSGAMLI----------DRNEGMLERCL 616
            .:.. .||..|.....  |....|::..::   |:.|.:|..::          :.:.|......
Zfish  5281 AISISSHPYPGQVQDE--DLMVGGLVSILV---ALCVLTGYSIMTASFVIYEVQEHHTGSKRLQQ 5340

  Fly   617 VAGITGP-----EILLSQVVTQFTVMLSQTTFVLIVSFYFFELTLVGNIWLVVALCILNGLCGMS 676
            ::||:.|     .......:....|:||   .|::.:|.....|...|:..|..|.:|.|.....
Zfish  5341 ISGISEPFYWIINFFYDMALYMIPVVLS---VVMVAAFQLPAFTERQNLAAVTLLLVLFGFSTFP 5402

  Fly   677 FGFVISCAV-DTERT-ATYVAMGSFLPI--VMLCGIIW----------PIEG----------MFP 717
            :.:::|... |||.. ..||.:..|:.:  ::...||:          .|:.          :||
Zfish  5403 WMYLLSAMFKDTEMAFIGYVCINLFISVNTIISTSIIYFLGQLNQNDQSIQNIYQTMSNIFLVFP 5467

  Fly   718 LLQFFTAFLPLTKPTESMRSILQRGWGID---NPVVYN--GFISISSWVLVFLVLTILLL 772
            ...|....:.|.:  ..|:..:..|:|:|   ||...:  |::.||.::..|:..|:.||
Zfish  5468 QFSFGNGLMELAR--VDMQVQILSGFGVDAYKNPFSMDVLGWMFISMFLQGFICFTLRLL 5525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 82/318 (26%)
YadH 578..773 CDD:440604 47/239 (20%)
abca12XP_686632.6 rim_protein 4..>93 CDD:130324
COG5412 <2412..2813 CDD:444167
rim_protein 4105..5897 CDD:130324 186/970 (19%)
Blue background indicates that the domain is not in the aligned region.

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