DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and abca8

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_031749971.1 Gene:abca8 / 549630 XenbaseID:XB-GENE-1005441 Length:1619 Species:Xenopus tropicalis


Alignment Length:328 Identity:87/328 - (26%)
Similarity:158/328 - (48%) Gaps:27/328 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LAARRRLFISQPSTLATRRQQAVCV----RRAHKM-YGSS---KNPNVVLDGLNMTVPKGSIYGL 82
            ||.|.|:.:|  ||.....::.:.:    |:.:|: .|.|   ||.......::..|.||.:.||
 Frog  1249 LAERERVKMS--STTNNMEEKPIIIVDSLRKEYKVKKGKSFFKKNKKAATKNISFCVRKGEVLGL 1311

  Fly    83 LGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPG-SRGSGV-PGPRIGYMPQEIALYGEFTMRET 145
            ||.:|.||||.:..:.|..|..:||:.:.|..|. |:.|.. |...:||.||:..|:...|:::.
 Frog  1312 LGPNGAGKTTSIYMLAGEIRPTAGEVLLCGTDPDKSQNSQYDPTGSLGYCPQDNPLWPNLTVKQH 1376

  Fly   146 LIYFGIISAMSKGDIEDRTEFLLKLLNL-PNASKFVKNLSGGQQRRVSLAVALLHEPELLILDEP 209
            |..:..:..:.|.|.|...:.:.:.|.| .:..|..:.||.|..|:|..|:::|..|.:::||||
 Frog  1377 LEIYAAVKGLKKKDAETAIKRVSEALELKEHLEKAARKLSAGVSRKVCFAISMLGNPNIVLLDEP 1441

  Fly   210 TVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDEC-AQAHMIGLLRGGKMLAEESPDYLRQQY 273
            :.|:||..:|.:|..:....:|.....|:||||::|. |....:.::..||:....|...|:.::
 Frog  1442 STGLDPKGQQRLWRAIRSAFRNKDRGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGSIQQLKSKF 1506

  Fly   274 NADSLEDVFLK------------LSVLQNMGKRRR-SSIAQEIVEQVTVPAISNPALDMSDEQHA 325
            ....|.::.:|            :.:..:..::.| ||:....:....|.::|...||:.:.:.|
 Frog  1507 GKGYLLEIKVKNSNQVDQIHNEIIQIFPHAARQDRFSSLLVYKIPVENVQSLSKAFLDLEEAKRA 1571

  Fly   326 AEI 328
            ..|
 Frog  1572 YNI 1574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 71/258 (28%)
YadH 578..773 CDD:440604
abca8XP_031749971.1 rim_protein <225..1601 CDD:130324 87/328 (27%)
Blue background indicates that the domain is not in the aligned region.

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