DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment osy and Abca17

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001026792.2 Gene:Abca17 / 381072 MGIID:3625331 Length:1733 Species:Mus musculus


Alignment Length:803 Identity:186/803 - (23%)
Similarity:314/803 - (39%) Gaps:244/803 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TRRQQAVCVRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSG 106
            |.:...:.::..:|::.|.::....:..|:|.:.||.:..|||.:|.||||:.|.:.|....:.|
Mouse   513 TNQMNTIEIQHLYKVFYSGRSKRTAIRDLSMNLYKGQVTVLLGHNGAGKTTVCSVLTGLITPSKG 577

  Fly   107 EIWVLGGRPGS-----RGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEF 166
            ..::.|.....     |.|      :|:.||...|:..||:.:.|.::|.:..:|..|..::|:.
Mouse   578 HAYIHGCEISKDMVQIRKS------LGWCPQHDILFDNFTVTDHLYFYGQLKGLSPQDCHEQTQE 636

  Fly   167 LLKLLNLP----NASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVD 227
            :|.||.|.    :.|||   ||||.:|::|:.:||:...::|||||||.|:|...|::|||.|..
Mouse   637 MLHLLGLKDKWNSRSKF---LSGGMKRKLSIGIALIAGSKVLILDEPTSGLDSPSRRAIWDLLQQ 698

  Fly   228 ITKNGHTTVIITTHYIDECAQAHMIG----LLRGGKMLAEESPDYLRQQYNA------------- 275
              :.|..||::|||::||   |.::|    :|..|::....||.:|:|:|.|             
Mouse   699 --QKGDRTVLLTTHFMDE---ADLLGDRIAILAKGELQCCGSPSFLKQKYGAGYYMTIIKTPLCD 758

  Fly   276 -DSLEDVF---LKLSVLQNMGKRRRSSIAQEIVEQVTVP--------AISNPALDMSDEQHAAEI 328
             ..|.:|.   :..:||:       |:|.:|::  ||:|        |:.|   |:...|....|
Mouse   759 TSKLSEVIYHHIPNAVLE-------SNIGEEMI--VTLPKKTIHRFEALFN---DLELRQTELGI 811

  Fly   329 SGEFGDNISMSSAARDPISTTAPAAPPLPPPQEIPTSFWYNLHVMQSHHLHALIWKNFLWMMRNV 393
            | .|..:::........:...|      .|...:.|...::||.:..||                
Mouse   812 S-TFATSVTTMEEVFIRVCKLA------DPSTNVLTEKRHSLHPLPRHH---------------- 853

  Fly   394 GVMLFIVGLPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTG-CNQTMLSCRYLD 457
                   .:||.:|.  |...|..|..               .||...::|| |   :|..::..
Mouse   854 -------RVPVDRIK--CLHSGTFPVS---------------TEQPMRLNTGFC---LLCQQFYA 891

  Fly   458 MLVKNKSMVVQYVTDDEMAYEEVRKGRAW----AALVIQPNYTASLMERVEDGRYAEDGTIESSD 518
            ||:|            ::.|..    |.|    :..|:.|                         
Mouse   892 MLLK------------KITYSR----RNWMLVLSVQVLLP------------------------- 915

  Fly   519 LAVRMDWSNQQISQLLYRDLQYTFFNFVGDMLSDCDVNPKLGRVPVDFQHPVYG----------- 572
            ||:.|              |..|||||         ...||..||::.....||           
Mouse   916 LAIIM--------------LSLTFFNF---------KLRKLDNVPLELTLQTYGQTIVPFFIAEN 957

  Fly   573 -YRNPNFTDFAAPGVILTIIFFLAVAVTSGAMLIDRNEGMLERCLV-AGITGPEIL--LSQVVTQ 633
             :.:|..:|           .|:.:.|.:|.:.: |.:|.:|..|: .....||..  |..|...
Mouse   958 SHLDPQLSD-----------DFVKMLVAAGQVPL-RIQGSVEDFLLKKAKEAPEGFDKLYVVAAS 1010

  Fly   634 FTVMLSQTTFVLIVSFYFFE-----LTLVGNIWLVVALCILNGLCGMSFGFVIS------CAVDT 687
            |..:.:.||...:.:...:.     ||||.|:       :...|.|.:.....:      .|::.
Mouse  1011 FEDVNNHTTVKALFNNQAYHSPSLALTLVDNL-------LFKLLSGANASITTTNYPQPQTAIEV 1068

  Fly   688 ERTATYVA-MGSFLPIVMLCGIIWPIEGMFPLLQFFTAFLPLTKPTESMRS-ILQRGWGIDNPVV 750
            ..:..|.. .|.:|.:..|.||.:          ..::|..||...:|::| .||...|:...|.
Mouse  1069 SESILYQGPKGHYLVVNFLFGIAF----------LSSSFSILTVGEKSVKSKSLQFVSGVSTAVF 1123

  Fly   751 YNGFISISSWVLV-FLVLTILLL 772
            :   :|...|.|: |||.|:||:
Mouse  1124 W---LSALLWDLISFLVPTLLLV 1143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 80/264 (30%)
YadH 578..773 CDD:440604 47/212 (22%)
Abca17NP_001026792.2 rim_protein <209..1684 CDD:130324 186/803 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1681..1733
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.