DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and abt-5

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:NP_001364572.1 Gene:abt-5 / 173081 WormBaseID:WBGene00000023 Length:1582 Species:Caenorhabditis elegans


Alignment Length:814 Identity:177/814 - (21%)
Similarity:306/814 - (37%) Gaps:218/814 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRG 119
            |:|   :|....::||::...:|.:..|||.:||||:|....|.|..:...|:: ::||...:..
 Worm   458 KVY---QNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKV-MIGGIDANAN 518

  Fly   120 SGVPGPRIGYMPQEIALYGEFTMRETLIYFGIISAMSKG-DIEDRTEFLLKLLNLPN-ASKFVKN 182
            .......|||.||...:|.|.|:.|.|.....:...|.| |.:...|.|||.:.|.: .:...||
 Worm   519 RAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQIELTDKRNTLAKN 583

  Fly   183 LSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDECA 247
            ||||.:|::.:.:|::....:::|||||.|:||..|..:.:.|..:  ....|:::||||:||..
 Worm   584 LSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQNMLALV--KADRTILLTTHYMDEAE 646

  Fly   248 Q-AHMIGLLRGGKMLAEESPDYLRQQYNA---------------------DSLEDV--------- 281
            : ...|.::..|||.|..|..||:|:|..                     ::..||         
 Worm   647 KLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTLVFKSVHDPMRPRKSYETAYDVCKTVCSTAL 711

  Fly   282 -------FLKLSVLQNMGKRRRSSIAQEIVEQVTVPAISNPAL-----DMSDEQHAAEISGEFGD 334
                   .:::|:|:.  ::.|.....:|:|.|.....:||..     |:.::....|:: ..| 
 Worm   712 VKDERGQMIEISILET--EKSRLPTLLKILESVMEEDYNNPEFQALEPDIQEKCRTLELA-TIG- 772

  Fly   335 NISMSSAAR---------DPISTTAPAAPPLPPPQEIPTSFWYNLHVMQS--HHLHALIW----K 384
             :||||..:         |.|.............::..|...|.:...:.  ..|..::|    |
 Worm   773 -VSMSSLEQVFIKIGDECDDIMNGTGVDKKTERQEKFSTLVQYKIQQPKQGFSKLMMVVWALLQK 836

  Fly   385 NFLWMMRN-VGVMLFIVGLPVVQILLFCYAI--------------GHDPTG-------LKLAVAN 427
            ...::.|| |.:.|.|: ||::.:.||....              ..||:.       |:|...|
 Worm   837 RAYYLYRNPVQITLQII-LPLLTLWLFAVPFLRLEPKPPKLSDIESFDPSQYPHSTVLLQLENEN 900

  Fly   428 HEMSGEMI--MEQFCPVHTGCNQTMLSCRYLDMLVKNKSMV-------VQYVTDDEMAYEEVRKG 483
            .:.....:  ...|..|..|.|.      :...|||..|.|       |:.....:..:.::.:|
 Worm   901 DDRLANYLNSFSNFEVVKVGYND------HYGYLVKKYSQVFKTLGFIVKVNKKGDSKFYKISQG 959

  Fly   484 RAWAALVIQPNYTASLMERVEDGRYAEDGTI-ESSDLAVRMDWSNQQISQLLYRDLQYTFFNFVG 547
            ...||:::  |..||.|       |..|.:: :...:..|:.|.|.  .::.|..|. :||.|..
 Worm   960 DKNAAILM--NIIASAM-------YLRDPSVTKLPHVTSRVIWMND--PKIKYEGLA-SFFLFEN 1012

  Fly   548 DMLSDCDVNPKLGRVPVDFQHPVYGYRNPNFTDFAAPGVILTIIFFLAVA----VTSGAMLIDRN 608
                                                       ||||.|.    :.|...||:  
 Worm  1013 -------------------------------------------IFFLLVLAGIFIQSTVYLIE-- 1032

  Fly   609 EGMLERCLVAGITGPEILLSQVVTQFTVMLSQTTF---VLIVSFYFFELTLVGNIWLVVALCILN 670
                           |.:......|:...||...:   |.:..|..|...|:..|..:::..:|.
 Worm  1033 ---------------EKICKFAHQQYLTGLSTIAYWGVVFLWDFLLFTFFLLYTIGFLISFGVLQ 1082

  Fly   671 G--------LCGMSFGF-----VISCAVDTERTATYVAMGSFLPIVMLCGIIWPIEGMFPLLQFF 722
            |        ..|:.|.|     :.|..::|.      ..|:|| :.|.|.|.|.   .:.::...
 Worm  1083 GHIHEIVVIFYGLLFYFAPLVYLTSALINTP------TRGNFL-LYMFCCIPWL---AYSIVSEL 1137

  Fly   723 TAFLPLTKPTESMRSILQRGWGIDNPVVYNGFIS 756
            ..|.|:.|.::.    ::.|:.|.||.:  ||::
 Worm  1138 HNFPPIQKYSDE----IEYGFRIFNPSI--GFLA 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 74/269 (28%)
YadH 578..773 CDD:440604 40/199 (20%)
abt-5NP_001364572.1 ABC2_membrane_3 <158..391 CDD:463674
rim_protein <419..1569 CDD:130324 177/814 (22%)
Blue background indicates that the domain is not in the aligned region.

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