DRSC/TRiP Functional Genomics Resources

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Protein Alignment osy and Abca2

DIOPT Version :10

Sequence 1:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster
Sequence 2:XP_006497672.1 Gene:Abca2 / 11305 MGIID:99606 Length:2464 Species:Mus musculus


Alignment Length:401 Identity:105/401 - (26%)
Similarity:175/401 - (43%) Gaps:67/401 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PPTAPAATATTANSDLDLAARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVV-LDGLNM 72
            |...|.:| .....|:|:|:.|:..:...:.     ...|.:....|:|.|.|...:: :|.|.:
Mouse  2048 PQRLPVST-KPVEDDVDVASERQRVLRGDAD-----NDMVKIENLTKVYKSRKIGRILAVDRLCL 2106

  Fly    73 TVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGV------PGPRIGYMP 131
            .|..|..:||||.:|.|||:....:.|......||.:|       .|..|      ....:||.|
Mouse  2107 GVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFV-------NGHSVLKDLLQVQQSLGYCP 2164

  Fly   132 QEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLPN-ASKFVKNLSGGQQRRVSLAV 195
            |..||:.|.|.||.|..:..:..:...|.....::.|:.|.|.. |.|.....|||.:|::|.|:
Mouse  2165 QFDALFDELTAREHLQLYTRLRGIPWKDEAQVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAI 2229

  Fly   196 ALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDEC-AQAHMIGLLRGGK 259
            ||:..|..:.|||||.|:||..|:.:|:.::|:.|.|. :|::|:|.::|| |....:.::..|:
Mouse  2230 ALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGR 2293

  Fly   260 MLAEESPDYLRQQY-----------NADSLEDV--FLKLSVLQNMGKRRRS------------SI 299
            :....|..:|:.::           ::.:::||  |...:..:.|.|.|..            |:
Mouse  2294 LRCLGSIQHLKNRFGDGYMITVRTKSSQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISL 2358

  Fly   300 AQEI--VEQVTVP------AISNPALDMSDEQHAAEISGEFGDNISMSSAARDPISTTAPAA--- 353
            ||..  :|||...      ::|...||......|.:.|    ||:....|  :|.|..:|..   
Mouse  2359 AQVFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFAKKQS----DNVEQQEA--EPSSLPSPLGLLS 2417

  Fly   354 --PPLPPPQEI 362
              .|.|.|.|:
Mouse  2418 LLRPRPAPTEL 2428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
osyNP_001034071.1 CcmA 50..285 CDD:440746 73/256 (29%)
YadH 578..773 CDD:440604
Abca2XP_006497672.1 rim_protein 58..2398 CDD:130324 95/367 (26%)
Blue background indicates that the domain is not in the aligned region.

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