DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)m8-HLH and her13

DIOPT Version :10

Sequence 1:NP_524513.1 Gene:E(spl)m8-HLH / 43161 FlyBaseID:FBgn0000591 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001017901.1 Gene:her13 / 550600 ZFINID:ZDB-GENE-050228-1 Length:224 Species:Danio rerio


Alignment Length:211 Identity:53/211 - (25%)
Similarity:91/211 - (43%) Gaps:53/211 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGILRMDKAEMLE------SAVIFMRQQKTPK 69
            :|.:||::|::||||:|:.|.:|:||   |..:|...:|:.||:||      .:::..|.|:| .
Zfish    25 RKTRKPIVEKKRRARINESLQDLRTL---LTNNDLQTKMENAEVLELTVKRVESILQSRSQET-G 85

  Fly    70 KVAQEEQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVM-----------THLGRVYKNL 123
            .|.||..    :.|..||:..::||...:::.||:...:...::           .||..:.|:|
Zfish    86 TVTQEAS----ERFAAGYIQCMHEVHTFVSTCPGIEARVAAELLNHLLESMPLNENHLHEMIKDL 146

  Fly   124 ----------QQFHEAQSAA------------DFIQNSMD---CSSMDKAPLSPASSGYHSDCDS 163
                      .|..|||:..            .|:.|...   ||.:|:......|:......|.
Zfish   147 ISEPSSSGDSWQSGEAQNPGRHCVSGMSSELPQFLSNPFCDDLCSDLDETETEERSASAEDTLDF 211

  Fly   164 PAPSPQPMQQPLWRPW 179
               |.....:.:||||
Zfish   212 ---SMVTHSKFMWRPW 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m8-HLHNP_524513.1 bHLH-O_ESM5_like 12..70 CDD:381486 23/63 (37%)
ORANGE 81..125 CDD:128787 11/64 (17%)
her13NP_001017901.1 bHLH_SF 23..80 CDD:469605 20/57 (35%)
Hairy_orange 94..133 CDD:462193 7/38 (18%)

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