DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)m8-HLH and hes5.8

DIOPT Version :10

Sequence 1:NP_524513.1 Gene:E(spl)m8-HLH / 43161 FlyBaseID:FBgn0000591 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_002933896.1 Gene:hes5.8 / 100495414 XenbaseID:XB-GENE-22064040 Length:145 Species:Xenopus tropicalis


Alignment Length:171 Identity:40/171 - (23%)
Similarity:70/171 - (40%) Gaps:42/171 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QKVKKPMLERQRRARMNKCLDNLKTLV-AELRGDDGILRMDKAEMLESAVIFMRQQKTPKKVAQE 74
            :|::||::|:.||.|:|..::.|:.|: .|....:...:.:||::||.||.|::|.     :|.:
 Frog    15 RKIRKPVVEKMRRDRINSSIEQLRMLLEKEFEKHNLPSKPEKADILEVAVGFLQQH-----IATK 74

  Fly    75 EQSLPLDSFKNGYMNAVNEVSRVMASTPGMSVDLGKSVMTHLGRVYKN-LQQFHEAQSAADFIQN 138
            ...:...|:|.||...|.:....:::              |......| |:.||..|.::.....
 Frog    75 TDEISGKSYKEGYSKCVEDSVHFLSA--------------HNQHSQGNLLRSFHGHQFSSGETHQ 125

  Fly   139 SMDCSSMDKAPLSPASSGYHSDCDSPAPSPQPMQQPLWRPW 179
            |..|...                     ||....:.|||||
 Frog   126 SRLCHGQ---------------------SPVTNSKVLWRPW 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)m8-HLHNP_524513.1 bHLH-O_ESM5_like 12..70 CDD:381486 19/58 (33%)
ORANGE 81..125 CDD:128787 8/44 (18%)
hes5.8XP_002933896.1 bHLH-O_HES5 16..72 CDD:381467 19/60 (32%)
Hairy_orange 81..>106 CDD:470640 6/38 (16%)

Return to query results.
Submit another query.