DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mbeta-HLH and hes5.2

DIOPT Version :10

Sequence 1:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001037974.1 Gene:hes5.2 / 733755 XenbaseID:XB-GENE-876635 Length:158 Species:Xenopus tropicalis


Alignment Length:197 Identity:47/197 - (23%)
Similarity:85/197 - (43%) Gaps:50/197 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LEMEMSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHM 67
            |:.:.....:..|:.||::|:.||.|||..:::||.:: |.:..:.:...:||||||||:||.::
 Frog     8 LDQQKMTPKEKNKLRKPVVEKMRRDRINSSIEQLKGLL-ETVFHKQQPNVKLEKADILEMTVTYL 71

  Fly    68 KKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLA---AVPGVSVDLGTQLM 129
            :    |:.|::.|   .:..:.|    |...::.||.....||...|:   ..|..:     :|:
 Frog    72 R----QQTLQIKS---EIPHNND----IQMDYKDGYSRCFEEVIDFLSLHQKQPETA-----KLI 120

  Fly   130 SHLGHRLNYLQVVVPSLPIGVPLQAPVEDQAMVTPPPSECDSLESGACSPA-PSEASSTSGPMWR 193
            ||...:.....  :.|.||                           .||.: .:..:.:|..:||
 Frog   121 SHFHSKATASS--ISSFPI---------------------------RCSQSKTANGTGSSSSLWR 156

  Fly   194 PW 195
            ||
 Frog   157 PW 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 23/67 (34%)
ORANGE 97..141 CDD:128787 9/46 (20%)
hes5.2NP_001037974.1 bHLH-O_HES5 20..77 CDD:381467 23/61 (38%)
ORANGE 90..128 CDD:128787 9/42 (21%)

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