DRSC/TRiP Functional Genomics Resources

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Protein Alignment E(spl)mdelta-HLH and her4.2

DIOPT Version :10

Sequence 1:NP_524503.2 Gene:E(spl)mdelta-HLH / 43150 FlyBaseID:FBgn0002734 Length:173 Species:Drosophila melanogaster
Sequence 2:XP_073794021.1 Gene:her4.2 / 100148329 ZFINID:ZDB-GENE-060815-1 Length:209 Species:Danio rerio


Alignment Length:168 Identity:44/168 - (26%)
Similarity:70/168 - (41%) Gaps:45/168 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLKAQQQQRVANPQ 81
            |:.||::|:.||.|:|..:::||.|:......| :..|:.|||||||:|:::|:..|:...|.. 
Zfish    76 KLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQ-QPDSRQEKADILEMTLDFLRRSQKSSAAGD- 138

  Fly    82 SPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQEEEIIDMAEEP 146
                          |.::...|.....|..| :..:..|.|||...|.              :.|
Zfish   139 --------------GRSRCVQEAVSFLSQCP-VQTQSHTRLMKLFLHM--------------QTP 174

  Fly   147 VNLADQ-KRSKSPREEDIHHG----------EEVWRPW 173
               ||| .|..:|:..:.|..          ..:||||
Zfish   175 ---ADQHTRVDNPQTTETHANSSAKQHTPARSHIWRPW 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mdelta-HLHNP_524503.2 bHLH-O_ESMB_like 9..77 CDD:381584 23/59 (39%)
ORANGE 91..135 CDD:128787 9/43 (21%)
her4.2XP_073794021.1 None

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