DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(spl)mdelta-HLH and hes5.3

DIOPT Version :10

Sequence 1:NP_524503.2 Gene:E(spl)mdelta-HLH / 43150 FlyBaseID:FBgn0002734 Length:173 Species:Drosophila melanogaster
Sequence 2:XP_002933894.1 Gene:hes5.3 / 100101782 XenbaseID:XB-GENE-480450 Length:160 Species:Xenopus tropicalis


Alignment Length:165 Identity:43/165 - (26%)
Similarity:71/165 - (43%) Gaps:28/165 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLKAQQQQR 76
            |:...|:.||::|:.||.|:|..:::|::|:....... :..||.||||||||.|.:||.|...:
 Frog    21 TKQKNKIRKPMVEKMRRDRINSSINQLQNLLEKEFQLL-QPDSKPEKADILELAVKFLKQQICSQ 84

  Fly    77 VANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFS---TVPGLDLKFGTHLMKQLGHQLKDMKQEEE 138
            ..|.:....|      |..||:...:|.....|   |...:.||...|.               :
 Frog    85 SKNNRKDYQD------FSQGYSNCLHETFAFLSFHRTEEEMQLKLMNHF---------------Q 128

  Fly   139 IIDMAEEPVNLADQKRSKSPREEDIHHGEEVWRPW 173
            .:|.....:::: ....|.|  ..:...:.:||||
 Frog   129 CLDSQPRGISVS-SSHQKGP--GPVASTKILWRPW 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(spl)mdelta-HLHNP_524503.2 bHLH-O_ESMB_like 9..77 CDD:381584 25/64 (39%)
ORANGE 91..135 CDD:128787 9/46 (20%)
hes5.3XP_002933894.1 bHLH-O_HES5 26..84 CDD:381467 24/58 (41%)
Hairy_orange 93..135 CDD:470640 11/62 (18%)

Return to query results.
Submit another query.