DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and SOS3

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_197815.1 Gene:SOS3 / 832494 AraportID:AT5G24270 Length:222 Species:Arabidopsis thaliana


Alignment Length:214 Identity:61/214 - (28%)
Similarity:99/214 - (46%) Gaps:36/214 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALED---LCRQTKFTKQEIRVMYRGFK----TECPEGVVHEDCFKDIYAKFFPHGNSSLYAHY 83
            |...||   |...|.||.:|:..:|..||    :...:|::|::.|:  .|.|......:|:|..
plant    16 PPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQ--LALFRNRNRRNLFADR 78

  Fly    84 VFKAFDVNCNGAISFRDLLVTLSTLLRGS-VYERLRWTFKLYDLNGDGRISRGELSEIILAIHEL 147
            :|..|||..||.|.|.:.:.:|......: |:|::::.||||||...|.|.|.||.|:::|:   
plant    79 IFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL--- 140

  Fly   148 MGRRPHQPE---DDRKARDQVDRVFRKLDLNQDGIITIEEFLE--------------ACLKDDLV 195
                .|:.|   .:......||:.|.:.|...||.|.|:|:.:              ..|||  :
plant   141 ----LHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLPYLKD--I 199

  Fly   196 TRSLQMFDNDLXXQEGELE 214
            .|:...|.:..  :|.||:
plant   200 NRTFPSFVSSCEEEEMELQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 36/125 (29%)
SOS3NP_197815.1 FRQ1 53..181 CDD:444056 42/136 (31%)

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