DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and VSNL1

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001353733.1 Gene:VSNL1 / 7447 HGNCID:12722 Length:208 Species:Homo sapiens


Alignment Length:119 Identity:51/119 - (42%)
Similarity:80/119 - (67%) Gaps:0/119 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KPIPVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKA 87
            |..|..:|||.:.|:|.:.|::..|:||..:||.|.::.:.|:.:|.||||:|::|.:|.:.|:.
Human     7 KLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGDASKFAQHAFRT 71

  Fly    88 FDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEII 141
            ||.|.:|.|.||:.:..||...|||..::|.|.|.:|||:|||:|:|.|:.|||
Human    72 FDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVEMLEII 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 29/62 (47%)
VSNL1NP_001353733.1 EFh 36..90 CDD:238008 20/53 (38%)
EFh 65..125 CDD:238008 27/59 (46%)

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