DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and hpcal1

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_031757604.1 Gene:hpcal1 / 733484 XenbaseID:XB-GENE-947040 Length:258 Species:Xenopus tropicalis


Alignment Length:168 Identity:67/168 - (39%)
Similarity:109/168 - (64%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..|:||...|:||..|::..|:||..:||.|.:..:.||.|||.|||:|::|.:|.:||:.||.
 Frog    10 PEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVEEFKKIYANFFPYGDASKFAEHVFRTFDT 74

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            |.:|.|.||:.::.||...||.:.::|:|.|.:|||:|:|.|||||:.||:.||::::......|
 Frog    75 NGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQAIYKMVSSVMKMP 139

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDD 193
            ||:.....:.|::|:::|.|.|.:......|: |:|:|
 Frog   140 EDESTPEKRTDKIFKQMDTNNDALSYYVTGLK-CIKED 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 40/107 (37%)
hpcal1XP_031757604.1 FRQ1 21..161 CDD:444056 57/139 (41%)
EFh 65..126 CDD:238008 29/60 (48%)

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