DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and Ncald

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_598855.2 Gene:Ncald / 52589 MGIID:1196326 Length:193 Species:Mus musculus


Alignment Length:175 Identity:68/175 - (38%)
Similarity:113/175 - (64%) Gaps:0/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..::||...|.||:.||:..|:||..:||.|.:..:.||.||..|||:|::|.:|.:||:.||.
Mouse    10 PEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA 74

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            |.:|.|.||:.::.||...||.:.::|:|.|.:|||:|:|.||:.|:.||:.||::::......|
Mouse    75 NGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMP 139

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
            ||:.....:.:::||::|.|:||.:::|||:.....|..:.|.||
Mouse   140 EDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLLQ 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 41/107 (38%)
NcaldNP_598855.2 FRQ1 21..175 CDD:444056 60/153 (39%)

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