DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5890 and guca1g

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001011660.1 Gene:guca1g / 494572 ZFINID:ZDB-GENE-050120-1 Length:187 Species:Danio rerio


Alignment Length:163 Identity:52/163 - (31%)
Similarity:87/163 - (53%) Gaps:5/163 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCNGAISFRDLLVTLS 106
            ||:.:|..|...||.|.:|...|:.|:.........:||...:||:||.|.:..|.|.:.:..:.
Zfish    17 EIQPLYTRFMKVCPSGALHLHEFRRIFGVQSSSEEEALYMETIFKSFDTNRDNVIDFMEFVAAVH 81

  Fly   107 TLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDDRKARDQVDRVFRK 171
            .:|||::.:||:|:||:||.:.:|::.|.|:..:|..:.:|...|.:.     ...:..||:|..
Zfish    82 LVLRGNLEDRLKWSFKVYDRDENGKLDRQEVIHVIRILCKLKKNRINM-----TPVEICDRIFEL 141

  Fly   172 LDLNQDGIITIEEFLEACLKDDLVTRSLQMFDN 204
            ||.|.||.|::.||||...||..:...|::..|
Zfish   142 LDENNDGQISLSEFLEGAEKDAWIMDLLKLDTN 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 36/107 (34%)
guca1gNP_001011660.1 FRQ1 44..161 CDD:444056 38/121 (31%)

Return to query results.
Submit another query.