DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and LOC4576041

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_061513554.1 Gene:LOC4576041 / 4576041 VectorBaseID:AGAMI1_009183 Length:324 Species:Anopheles gambiae


Alignment Length:222 Identity:57/222 - (25%)
Similarity:93/222 - (41%) Gaps:43/222 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVM---YRGFKTECP----------EGV----------VHEDCFKDI 67
            |..||...|:|.|:|.|:..:   ||.......          .||          :....|:::
Mosquito   106 PKMLEMYKRRTHFSKVEVEALCKIYRKLVANASMNSKALAASNPGVIAKAGSSMDGIDRSVFREL 170

  Fly    68 YAKFFPHGNSSLYAHYVFKAFDVNCNG-AISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGR 131
            ....|...........:|.|::....| .|.....|:.|||.|:||..|:..:.|::||||.||.
Mosquito   171 LHSTFDIVTEETLMERIFCAWEKGYEGLPIRLEGWLMGLSTFLKGSQAEKTAFCFRVYDLNSDGF 235

  Fly   132 ISRGELSEIILAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEA-------- 188
            |::.|:..:   :...:.::|...:.|...:|.|:...||||:::||.|:.:::.||        
Mosquito   236 ITKDEMFAL---LRNCLIKQPQDEDPDEGVKDLVEIALRKLDMDKDGKISFQDYQEAIAEEPLLL 297

  Fly   189 -----CLKDDLVTRSLQMFDNDLXXQE 210
                 ||..|..|.|   |.:.|..||
Mosquito   298 EAFGQCLPSDRATMS---FLSTLQAQE 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 32/108 (30%)
LOC4576041XP_061513554.1 None

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