Protein Alignment CG5890 and d-cup

DIOPT Version :10

• Sequence 1: NP_001356889.1
• Gene: CG5890 / 43126
• FlyBaseID: FBgn0039380
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: NP_650235.1
• Gene: d-cup / 41580
• FlyBaseID: FBgn0038089
• Length: 219
• Species: Drosophila melanogaster
• Alignment Length: 208
• Identity: 55/208 - (26%)
• Similarity: 80/208 - (38%)
• Gaps: 47/208 - (22%)

  Fly    31 DLCRQTKFTKQEIRVMYRGFKTECPEGVVHED----CFKDIYAKFFPHGNSSLYAHYVFKAFDVN 91
            ||....:| .|..:.:|.|...:....|...|    |...||.|:......|  |..:..:..||
  Fly     4 DLTMNDRF-NQRFQSVYGGLVPQIARLVPFNDSEVTCILMIYYKYSLQNGPS--ARRITSSQFVN 65

  Fly    92 CNGAISFR--------DLLVTL----------------STLLRGSVYER-LRWTFKLYDLNGDGR 131
            .  .|.|:        |.:|||                .|:|.....|| :.:.:.:||.||.|
  Fly    66 I--VIGFQQLYDMDVVDRIVTLIAGGRKHVTPMEFVNYMTILMSRDMERKMEFAYMVYDKNGMG- 127

  Fly   132 ISRGELSEIILAIHELMGRRPHQPEDDRKAR---DQVDRVFRKLDLNQDGIITIEEFLEACLKDD 193
            |:|    |||.:..|    |....:||....   |.||.:..|.|.:|||.|:.||:....|:..
  Fly   128 INR----EIISSSVE----RFFVGDDDEVLEMRLDMVDFLLLKFDEDQDGYISFEEYRSIVLQQP 184

  Fly   194 LVTRSL-QMFDND 205
            .:...| .:|.:|
  Fly   185 RLLEFLGPIFPSD 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5890	NP_001356889.1	FRQ1	<80..188	CDD:444056	38/135 (28%)
d-cup	NP_650235.1	FRQ1	70..182	CDD:444056	34/120 (28%)