DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and kcnip3a

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_005169145.1 Gene:kcnip3a / 393792 ZFINID:ZDB-GENE-040426-1791 Length:259 Species:Danio rerio


Alignment Length:179 Identity:87/179 - (48%)
Similarity:131/179 - (73%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..||.|..||||||:|::.:|||||.|||.|:|.|:.||.||::|||.|:::.|||::|.|||:
Zfish    79 PEGLEQLQAQTKFTKKELQSLYRGFKNECPSGLVDEETFKTIYSQFFPQGDATTYAHFLFNAFDL 143

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            :.||:|.|.|.::.||.||||:|.|:|.|.|.|||:|.||.|::.|:..|:.:|:::|||..:..
Zfish   144 DRNGSIRFEDFVIGLSVLLRGTVTEKLNWAFNLYDINKDGYITKEEMLLIMKSIYDMMGRYTYPS 208

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFDN 204
            ..|....:.|::.|:|:|.|:||::|||||:|.|.||:.:..|:|:|:|
Zfish   209 VRDEAPSEHVEKFFQKMDRNRDGVVTIEEFIETCQKDENIMNSMQLFEN 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 49/107 (46%)
kcnip3aXP_005169145.1 FRQ1 109..244 CDD:444056 62/134 (46%)

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