DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and guca1c

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_919374.1 Gene:guca1c / 373099 ZFINID:ZDB-GENE-030829-1 Length:188 Species:Danio rerio


Alignment Length:164 Identity:48/164 - (29%)
Similarity:87/164 - (53%) Gaps:7/164 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCNGAISFRDLLVTL 105
            :::...|..|..|.|.|::.....|::.........:|.|...||..||::.:|.|.|.:.:..:
Zfish    14 EDMHYWYNKFMRESPSGLITLFELKNMLEMQGMTEEASSYVDQVFFTFDMDGDGYIDFVEYIAAV 78

  Fly   106 STLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQPEDDRKARDQVDRVFR 170
            |.||:|.:.::|:|.|||:|.:|:|:|.|.|:..|..||.::. |....|.|     |.|..::.
Zfish    79 SLLLKGEINQKLKWYFKLFDQDGNGKIDRDEMETIFKAIQDIT-RSYEIPPD-----DIVSLIYE 137

  Fly   171 KLDLNQDGIITIEEFLEACLK-DDLVTRSLQMFD 203
            ::|:|.:|.:|:|||:....: .|::....:|.|
Zfish   138 RIDVNNEGELTLEEFITGAKEHPDIMEMLTKMMD 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 38/107 (36%)
guca1cNP_919374.1 FRQ1 41..159 CDD:444056 39/123 (32%)

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