DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and CG2256

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster


Alignment Length:196 Identity:49/196 - (25%)
Similarity:91/196 - (46%) Gaps:30/196 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVM---YRGFKTECP----------------------EGVVHEDCFK 65
            |..|:.|.::|:|||.|:..:   ||...:.|.                      || :....|:
  Fly   110 PKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVEG-IDRIVFR 173

  Fly    66 DIYAKFFPHGNSSLYAHYVFKAFDVNCNG-AISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGD 129
            ::....|......:....:|.::|....| .:.....|:.|||.|||:..||..:.|::||||.|
  Fly   174 ELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCFRVYDLNTD 238

  Fly   130 GRISRGELSEIILAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDL 194
            |.|::.|:..:   :...:.::|...:.|...:|.|:.|.:|.||::||.:::|:|:.....:.|
  Fly   239 GFITKDEMFTL---LRNCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLEDFMGTVTAEPL 300

  Fly   195 V 195
            :
  Fly   301 L 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 33/108 (31%)
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 46/183 (25%)
EF-hand_7 224..292 CDD:463900 22/70 (31%)

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